Background: Transposable elements (TEs) shape genome evolution, gene expression and genetic variation. In the past decade, they have been shown to play a role in speciation, phenotypic evolution. How important are they for species that are rapidly expanding their range and adapting to new environments? This project will use already available whole genome sequences from hundreds of birds collected across environmental gradients in both native and introduced ranges to identify TEs and their genomic. The project will focus mainly on the house sparrow, Passer domesticus, a human-commensal species that is globally widespread due to human activity over the past 10,000 years. The overarching aim is to use a bioinformatics approach to identify TE-associated genes that might play a role in ecological, physiological and morphological adaptation to new environments. Insights from this project will have the potential to help us understand how other species might adapt to a rapidly changing world.
We are seeking: A motivated MSc student with an interest in the genetic and molecular mechanisms underlying adaptation to new environments. You will work with a large-scale genomic dataset to address a pressing evolutionary question and will have the opportunity to interact with our global network of collaborators.
What you will learn: You will learn how to answer evolutionary questions using modern techniques. You will gain experience in DNA wet lab work, bioinformatics, and genomics. There will also be opportunities for fieldwork and gaining experience in handling birds. The skills you will gain will provide an important foundation for future applications to PhD positions or to jobs in industry.
What we offer: This is an opportunity to join an international, friendly research group at CEES with a focus on close mentorship and skills development. We will conduct frequent lab meetings, group discussions and provide hands-on training.