Beskjeder

For project 2 you may need the lammps and matlab/python scripts found here. You run these in sequence

lammps < ljliquidA.lmp

Then run either modifylammpsdata.m or modifylammpsdata.py

lammps < ljtubeA.lmp

The results can be found in runb.dump

Good luck with project 2!

You can now find the scripts to run LAMMPS and record relevant data in Chapter 5 in the files chap05-matlab.pdf and chap05-python.pdf.

There is an error in the matlab program readdump_all.m - you can download a corrected version here.

You can now find the notes on how to run molecular dynamics simulations using either matlab or python with LAMMPS in the notes section.

Welcome to fys4460 spring 2016. Teaching starts Monday 25/1 in room FV414. This course is defined through the projects and the exam questions. We will use Frenkel and Smit's book on molecular dynamics for the first two projects (50%), and the lecture notes on percolation theory for the last project (50%).